Blood bacterial microbiome of Rodent78 M. natalensis (Hlalakahle) - SRA

SRX5967144: Blood bacterial microbiome of Rodent78 M. natalensis (Hlalakahle)
1 PACBIO_SMRT (PacBio RS II) run: 3,020 spots, 4.1M bases, 1.6Mb downloads

Design: PacBio Sequencing of the 16S rRNA gene

Submitted by: University of Pretoria

Study: Bacterial blood microbiome of rodents captured from a human/livestock/wildlife interface in rural South Africa

PRJNA546130 • SRP200360 • All experiments • All runs

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The aim of this project was to provide a comprehensive insight into bacterial pathogens in the blood of wild rodents captured from different habitat areas in the Mnisi community Mpumalanga Province South Africa using next-generation sequencing approaches.

Sample:

SAMN11953745 • SRS4874197 • All experiments • All runs

Organism: Mastomys natalensis

Library:

Name: F5R2

Instrument: PacBio RS II

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 3,020 spots, 4.1M bases, 1.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR9194178	3,020	4.1M	1.6Mb	2019-06-04

ID:: 8002650

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